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Q99250 | SCN2A_HUMAN | Sodium channel protein type 2 subunit alpha (SCN2A)

3D structures mapped by conservation among orthologs

[ Domain: "EF-hand" // EF-hand_7_6 ]

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[ Domain: "Voltage-gated ion channels" // Ion_trans ]

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[ Domain: "Voltage gated calcium channel IQ domain" // IQ_like ]

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[ Alpha Fold Model ] (go)


Known binders annotated in ChEMBL

IC50 table

molecule_chembl_id structure assay_type relation values units mol_wt smiles organism assay_chembl_id bao_label
CHEMBL3617050 OBDepict OH N H O O N NH N H H H N H N O N HO OH HN O O H S H O O HO HO IC50 = 0.0061 nM 552.48 N=C1N[C@@]23[C@H]([C@H]4NC(=N)N2C[C@](OS(=O)(=O)O)(C[C@H]2[C@@H](CO)CON2C4=O)C3(O)O)N1COC(=O)NO Homo sapiens CHEMBL3618797 cell-based format
CHEMBL3617063 OBDepict Cl O N F N F H H 2 N S HN O O N S N IC50 = 0.2 nM 534.96 Nc1nc2cc(-c3cc(Cl)ccc3Oc3cc(F)c(S(=O)(=O)Nc4ncns4)cc3F)ccc2[nH]1 Homo sapiens CHEMBL3806745 cell-based format
CHEMBL4060338 OBDepict CH 3 H NH NH HN O IC50 = 0.45 nM 295.47 CCCCCCCCCC[C@@H]1C[C@]2(CCCO2)NC(=N)N1 Homo sapiens CHEMBL3999227 cell-based format
CHEMBL501134 OBDepict HN N H HN H N H NH OH HO O NH O H 2 N IC50 = 1.0 nM 299.29 N=C1N[C@H]2[C@H](COC(N)=O)NC(=N)N3CCC(O)(O)[C@]23N1 Homo sapiens CHEMBL4321992 cell-based format
CHEMBL3662190 OBDepict O N H S F O O O H 3 C IC50 = 2.0 nM 435.56 CC1(COc2cc(F)c(C(=O)NS(=O)(=O)C3CC3)cc2C2CC2)CCC2(CC1)CC2 Homo sapiens CHEMBL4321992 cell-based format
CHEMBL4070670 OBDepict CH 3 H NH NH HN O IC50 = 2.1 nM 295.47 CCCCCCCCCC[C@H]1C[C@@]2(CCCO2)NC(=N)N1 Homo sapiens CHEMBL3999227 cell-based format
CHEMBL3341983 OBDepict Cl O F O NH 2 N F S NH O O N S N IC50 = 4.2 nM 535.94 Nc1noc2ccc(-c3cc(Cl)ccc3Oc3cc(F)c(S(=O)(=O)Nc4ncns4)cc3F)cc12 Homo sapiens CHEMBL3806745 cell-based format
CHEMBL4290579 OBDepict O S N H O N N N O IC50 = 7.0 nM 442.59 O=S(=O)(Nc1nnc2cc(OCC34CC5CC(CC(C5)C3)C4)c(C3CC3)cn12)C1CC1 Homo sapiens CHEMBL4256590 cell-based format
CHEMBL4082248 OBDepict CH 3 H NH H NH HN O HO O IC50 = 7.5 nM 339.48 CCCCCCCCCC[C@@H]1NC(=N)N[C@]2(CCCO2)[C@@H]1C(=O)O Homo sapiens CHEMBL3999227 cell-based format
CHEMBL4285790 OBDepict Cl O Cl N N N N H S O O CH 3 IC50 = 10.0 nM 427.31 CS(=O)(=O)Nc1nnc2cc(COc3cc(Cl)cc(Cl)c3)c(C3CC3)cn12 Homo sapiens CHEMBL4256590 cell-based format
CHEMBL4279238 OBDepict H 3 C S HN O O N N N O IC50 = 14.0 nM 416.55 CS(=O)(=O)Nc1nnc2cc(OCC34CC5CC(CC(C5)C3)C4)c(C3CC3)cn12 Homo sapiens CHEMBL4256590 cell-based format
CHEMBL507974 OBDepict HO OH H O H O H OH H OH N H H OH N H OH H 2 N IC50 = 14.0 nM 319.27 NC1=N[C@H](O)[C@H]2[C@H]3O[C@]4(O)O[C@@H]([C@@H](O)[C@@]2(N1)[C@@H]4O)[C@]3(O)CO Homo sapiens CHEMBL4321992 cell-based format
CHEMBL3657855 OBDepict F O N H O S N O O IC50 = 20.0 nM 462.59 O=C(NS(=O)(=O)N1CCC1)c1cc(C2CC2)c(OCC23CC4CC(CC(C4)C2)C3)cc1F Homo sapiens CHEMBL4321992 cell-based format
CHEMBL4064160 OBDepict CH 3 H NH H NH HN O HO O IC50 = 26.0 nM 339.48 CCCCCCCCCC[C@H]1NC(=N)N[C@@]2(CCCO2)[C@H]1C(=O)O Homo sapiens CHEMBL3999227 cell-based format
CHEMBL1269990 OBDepict Cl N N H O N IC50 = 50.0 nM 405.93 O=C(NCc1ccccc1N1CCCCC1)c1cncc(-c2ccc(Cl)cc2)c1 Homo sapiens CHEMBL1272889 single protein format
CHEMBL1270301 OBDepict Cl N N H O N N IC50 = 70.0 nM 406.92 O=C(NCc1cccnc1N1CCCCC1)c1cncc(-c2ccc(Cl)cc2)c1 Homo sapiens CHEMBL1272889 single protein format
CHEMBL486495 OBDepict O N O N CH 3 CH 3 H 3 C IC50 = 100.0 nM 394.56 CC(C)(C)c1ccc(-c2ccc(C(=O)N3CCN(C4CCCCC4)CC3)o2)cc1 Homo sapiens CHEMBL954008 cell-based format
CHEMBL2325014 OBDepict Cl O N NH 2 N H Cl F S NH O O N S IC50 = 110.0 nM 500.36 Nc1[nH]ncc1-c1cc(Cl)ccc1Oc1cc(F)c(S(=O)(=O)Nc2cscn2)cc1Cl Homo sapiens CHEMBL4321992 cell-based format
CHEMBL1269882 OBDepict Cl N N H O CH 3 IC50 = 110.0 nM 336.82 Cc1ccccc1CNC(=O)c1cncc(-c2ccc(Cl)cc2)c1 Homo sapiens CHEMBL1272889 single protein format
CHEMBL1269991 OBDepict Cl N N H O N O IC50 = 120.0 nM 407.9 O=C(NCc1ccccc1N1CCOCC1)c1cncc(-c2ccc(Cl)cc2)c1 Homo sapiens CHEMBL1272889 single protein format
CHEMBL510722 OBDepict H N N F F F F F F IC50 = 200.0 nM 356.27 FC(F)(F)c1cccc(-c2c[nH]c(-c3cccc(C(F)(F)F)c3)n2)c1 Homo sapiens CHEMBL1025443 cell-based format
CHEMBL3617053 OBDepict O N H S NH O O N S IC50 = 240.0 nM 449.56 O=C(Nc1ccc(S(=O)(=O)Nc2nccs2)cc1)C(c1ccccc1)c1ccccc1 Homo sapiens CHEMBL3618952 assay format
CHEMBL4854735 OBDepict F N HN S O O F F O H H N F F F F F IC50 = 270.0 nM 581.49 O=S(=O)(Nc1cccc(F)n1)c1cc(F)c(O[C@H]2CCN(CC(F)(F)F)C[C@@H]2c2ccc(F)c(F)c2)c(F)c1 Homo sapiens CHEMBL4813115 single protein format
CHEMBL482676 OBDepict O N O N Cl IC50 = 350.0 nM 372.9 O=C(c1ccc(-c2ccc(Cl)cc2)o1)N1CCN(C2CCCCC2)CC1 Homo sapiens CHEMBL954008 cell-based format
CHEMBL1277877 OBDepict CH 3 O N N NH O H 3 C CH 3 IC50 = 360.0 nM 347.42 CCOc1ccc(-c2cncc(C(=O)Nc3cc(C)cc(C)c3)n2)cc1 Homo sapiens CHEMBL1286453 single protein format
CHEMBL3809595 OBDepict F O F F N N N F F F IC50 = 400.0 nM 347.22 FC(F)(F)Oc1ccc(-c2ccc3nnc(C(F)(F)F)n3c2)cc1 Homo sapiens CHEMBL3813478 assay format
CHEMBL4276884 OBDepict O N H F S HN O O N S Cl O F F F IC50 = 429.0 nM 509.89 O=C(NCc1ccc(OC(F)(F)F)c(Cl)c1)c1ccc(S(=O)(=O)Nc2nccs2)c(F)c1 Homo sapiens CHEMBL4257701 single protein format
CHEMBL1277959 OBDepict CH 3 O N N NH O CH 3 IC50 = 470.0 nM 347.42 CCOc1ccc(-c2cncc(C(=O)NCc3ccccc3C)n2)cc1 Homo sapiens CHEMBL1286453 single protein format
CHEMBL698 OBDepict H 3 C NH O O N CH 3 H 3 C IC50 = 490.0 nM 264.37 CCCCNc1ccc(C(=O)OCCN(C)C)cc1 Homo sapiens CHEMBL3804575 cell-based format
CHEMBL3707218 OBDepict O N O O O O F F F IC50 = 600.0 nM 429.35 O=C1N(Cc2ccc(C(F)(F)F)o2)c2ccccc2[C@]12COc1cc3c(cc12)OCO3 Homo sapiens CHEMBL4321992 cell-based format
CHEMBL108347 OBDepict CH 3 O N H O N H NH IC50 = 630.0 nM 367.49 CCCCOc1ccc(C(=O)NC(=N)NCCCCc2ccccc2)cc1 Homo sapiens CHEMBL843814 cell-based format
CHEMBL1270207 OBDepict H 3 C O N HN O N Cl IC50 = 670.0 nM 367.84 CCOc1ncccc1CNC(=O)c1cncc(-c2ccc(Cl)cc2)c1 Homo sapiens CHEMBL1272889 single protein format
CHEMBL108727 OBDepict CH 3 O N H O N H NH IC50 = 760.0 nM 339.44 CCOc1ccc(C(=O)NC(=N)NCCCCc2ccccc2)cc1 Homo sapiens CHEMBL843814 cell-based format
CHEMBL321883 OBDepict CH 3 O N H O N H NH IC50 = 820.0 nM 325.41 COc1ccc(C(=O)NC(=N)NCCCCc2ccccc2)cc1 Homo sapiens CHEMBL843814 cell-based format
CHEMBL110572 OBDepict NH HN N H O IC50 = 860.0 nM 345.45 N=C(NCCCCc1ccccc1)NC(=O)c1cccc2ccccc12 Homo sapiens CHEMBL843814 cell-based format
CHEMBL4293085 OBDepict O N H F S HN O O N S N Cl O F F F IC50 = 920.0 nM 510.88 O=C(NCc1ccc(OC(F)(F)F)c(Cl)c1)c1ccc(S(=O)(=O)Nc2ncns2)c(F)c1 Homo sapiens CHEMBL4257701 single protein format
CHEMBL1277607 OBDepict Cl HN O N N Cl IC50 = 1000.0 nM 372.26 O=C(NCCc1ccc(Cl)cc1)c1cncc(-c2ccc(Cl)cc2)n1 Homo sapiens CHEMBL1286453 single protein format
CHEMBL1277958 OBDepict CH 3 O N N HN O CH 3 IC50 = 1000.0 nM 333.39 CCOc1ccc(-c2cncc(C(=O)Nc3cccc(C)c3)n2)cc1 Homo sapiens CHEMBL1286453 single protein format
CHEMBL1278138 OBDepict N N N N H O CH 3 IC50 = 1000.0 nM 328.38 Cc1ccccc1CNC(=O)c1cncc(-c2ccc(C#N)cc2)n1 Homo sapiens CHEMBL1286453 single protein format
CHEMBL1277876 OBDepict Cl N N HN O N N IC50 = 1000.0 nM 393.88 O=C(NCc1cccnc1N1CCCC1)c1cncc(-c2ccc(Cl)cc2)n1 Homo sapiens CHEMBL1286453 single protein format