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Q9HBH1 | DEFM_HUMAN | "Peptide deformylase, mitochondrial" (PDF)

3D structures mapped by conservation among orthologs

[ Domain: "Peptide deformylase" // Pep_deformylase ]

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[ Alpha Fold Model ] (go)


Known binders annotated in ChEMBL

IC50 table Ki table

molecule_chembl_id structure assay_type relation values units mol_wt smiles organism assay_chembl_id bao_label
CHEMBL308333 OBDepict CH 3 H HN O HN O H OH N O H 3 C CH 3 H HO Ki = 0.3 nM 385.51 CCCCC[C@H](CC(=O)NO)C(=O)N[C@H](C(=O)N1CCC[C@H]1CO)C(C)C Homo sapiens CHEMBL762803 single protein format
CHEMBL122067 OBDepict H 3 C H N H O HN O H OH H 3 C H 3 C CH 3 N O CH 3 H 3 C IC50 = 1.0 nM 329.44 CCCC[C@H](CC(=O)NO)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762381 single protein format
CHEMBL4637933 OBDepict HO NH O H N O H N H O N S CH 3 IC50 = 2.78 nM 434.56 Cc1cnc(NC(=O)[C@@H]2CC3(CC3)CN2C(=O)[C@@H](CC(=O)NO)CC2CCCC2)s1 Homo sapiens CHEMBL4619395 assay format
CHEMBL4638057 OBDepict HO NH O H N O H N H O S N CH 3 IC50 = 2.99 nM 434.56 Cc1csc(NC(=O)[C@@H]2CC3(CC3)CN2C(=O)[C@@H](CC(=O)NO)CC2CCCC2)n1 Homo sapiens CHEMBL4619395 assay format
CHEMBL4632607 OBDepict HO NH O H N O H N H O CH 3 IC50 = 3.58 nM 427.55 Cc1ccc(NC(=O)[C@@H]2CC3(CC3)CN2C(=O)[C@@H](CC(=O)NO)CC2CCCC2)cc1 Homo sapiens CHEMBL4619395 assay format
CHEMBL4641062 OBDepict HO NH O H N O H O N N IC50 = 3.77 nM 438.53 O=C(C[C@@H](CC1CCCC1)C(=O)N1CC2(CC2)C[C@H]1c1nc(-c2ccccc2)no1)NO Homo sapiens CHEMBL4619395 assay format
CHEMBL4635911 OBDepict HO NH O H N O H O N N F F F F IC50 = 4.11 nM 524.52 O=C(C[C@@H](CC1CCCC1)C(=O)N1CC2(CC2)C[C@H]1c1nc(-c2ccc(F)cc2C(F)(F)F)no1)NO Homo sapiens CHEMBL4619395 assay format
CHEMBL4643984 OBDepict H 3 C N N O H N O H HN O OH IC50 = 4.24 nM 494.64 CCCCc1ccc(-c2noc([C@@H]3CC4(CC4)CN3C(=O)[C@@H](CC(=O)NO)CC3CCCC3)n2)cc1 Homo sapiens CHEMBL4619395 assay format
CHEMBL4649534 OBDepict OH HN O H N O H O N N F F F F IC50 = 4.85 nM 524.52 O=C(C[C@@H](CC1CCCC1)C(=O)N1CC2(CC2)C[C@H]1c1nc(-c2ccc(C(F)(F)F)cc2F)no1)NO Homo sapiens CHEMBL4619395 assay format
CHEMBL4639327 OBDepict CH 3 H N O HN O H OH N H O N F IC50 = 4.92 nM 406.46 CCCC[C@H](CC(=O)NO)C(=O)N1CC2(CC2)C[C@H]1C(=O)Nc1ccc(F)cn1 Homo sapiens CHEMBL4619395 assay format
CHEMBL4641416 OBDepict OH HN O H N O H O N N N F IC50 = 5.01 nM 457.51 O=C(C[C@@H](CC1CCCC1)C(=O)N1CC2(CC2)C[C@H]1c1nc(-c2ccc(F)cn2)no1)NO Homo sapiens CHEMBL4619395 assay format
CHEMBL4636545 OBDepict OH HN O H N O H O N N IC50 = 5.01 nM 478.59 O=C(C[C@@H](CC1CCCC1)C(=O)N1CC2(CC2)C[C@H]1c1nc(-c2ccc(C3CC3)cc2)no1)NO Homo sapiens CHEMBL4619395 assay format
CHEMBL4643967 OBDepict OH HN O H N O H O N N Br IC50 = 5.48 nM 517.42 O=C(C[C@@H](CC1CCCC1)C(=O)N1CC2(CC2)C[C@H]1c1nc(-c2ccc(Br)cc2)no1)NO Homo sapiens CHEMBL4619395 assay format
CHEMBL4636221 OBDepict HO N H O H N O H N H O N F IC50 = 5.87 nM 432.5 O=C(C[C@@H](CC1CCCC1)C(=O)N1CC2(CC2)C[C@H]1C(=O)Nc1ccc(F)cn1)NO Homo sapiens CHEMBL4619395 assay format
CHEMBL4634572 OBDepict HO N H O H N O H N H O N N IC50 = 5.87 nM 415.49 O=C(C[C@@H](CC1CCCC1)C(=O)N1CC2(CC2)C[C@H]1C(=O)Nc1cnccn1)NO Homo sapiens CHEMBL4619395 assay format
CHEMBL90193 OBDepict O N HO H N H O H CH 3 CH 3 H 3 C N O H 3 C CH 3 IC50 = 6.0 nM 369.51 CN(C)C(=O)[C@@H](NC(=O)[C@H](CC1CCCCC1)CN(O)C=O)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL4637166 OBDepict HO N H O H N O H N H O Br IC50 = 6.12 nM 492.41 O=C(C[C@@H](CC1CCCC1)C(=O)N1CC2(CC2)C[C@H]1C(=O)Nc1ccc(Br)cc1)NO Homo sapiens CHEMBL4619395 assay format
CHEMBL4640974 OBDepict HO N H O H N O H N H O IC50 = 6.42 nM 413.52 O=C(C[C@@H](CC1CCCC1)C(=O)N1CC2(CC2)C[C@H]1C(=O)Nc1ccccc1)NO Homo sapiens CHEMBL4619395 assay format
CHEMBL4645966 OBDepict OH HN O H N O H O N N Cl F F F IC50 = 6.47 nM 540.97 O=C(C[C@@H](CC1CCCC1)C(=O)N1CC2(CC2)C[C@H]1c1nc(-c2ccc(C(F)(F)F)cc2Cl)no1)NO Homo sapiens CHEMBL4619395 assay format
CHEMBL431210 OBDepict H 3 C H N H O N OH H O H 3 C H 3 C CH 3 N O CH 3 H 3 C IC50 = 7.0 nM 329.44 CCCC[C@H](CN(O)C=O)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL4635093 OBDepict HO NH O H N O H NH O F F F F IC50 = 7.01 nM 499.51 O=C(C[C@@H](CC1CCCC1)C(=O)N1CC2(CC2)C[C@H]1C(=O)Nc1ccc(F)cc1C(F)(F)F)NO Homo sapiens CHEMBL4619395 assay format
CHEMBL4637631 OBDepict OH HN O H N O H O N N F F F IC50 = 7.08 nM 492.5 O=C(C[C@@H](CC1CCCC1)C(=O)N1CC2(CC2)C[C@H]1c1nc(-c2cc(F)cc(F)c2F)no1)NO Homo sapiens CHEMBL4619395 assay format
CHEMBL4642360 OBDepict HO HN O H N O H H 2 C N H O N F IC50 = 7.15 nM 418.47 C=C1C[C@@H](C(=O)Nc2ccc(F)cn2)N(C(=O)[C@@H](CC(=O)NO)CC2CCCC2)C1 Homo sapiens CHEMBL4619395 assay format
CHEMBL4635263 OBDepict OH HN O H N O H O N N F F F IC50 = 7.19 nM 506.53 O=C(C[C@@H](CC1CCCC1)C(=O)N1CC2(CC2)C[C@H]1c1nc(-c2ccc(C(F)(F)F)cc2)no1)NO Homo sapiens CHEMBL4619395 assay format
CHEMBL316099 OBDepict O N HO H HN O H CH 3 CH 3 H 3 C N O H 3 C CH 3 IC50 = 8.0 nM 355.48 CN(C)C(=O)[C@@H](NC(=O)[C@H](CC1CCCC1)CN(O)C=O)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL4645936 OBDepict HO N H O H N O H N H O N S IC50 = 8.74 nM 420.54 O=C(C[C@@H](CC1CCCC1)C(=O)N1CC2(CC2)C[C@H]1C(=O)Nc1nccs1)NO Homo sapiens CHEMBL4619395 assay format
CHEMBL4646467 OBDepict HO NH O H N O H O N N H 3 C IC50 = 8.81 nM 466.58 CCc1ccc(-c2noc([C@@H]3CC4(CC4)CN3C(=O)[C@@H](CC(=O)NO)CC3CCCC3)n2)cc1 Homo sapiens CHEMBL4619395 assay format
CHEMBL4641901 OBDepict HO NH O H N O H N H O N S CH 3 IC50 = 8.94 nM 408.52 Cc1cnc(NC(=O)[C@@H]2CCCN2C(=O)[C@@H](CC(=O)NO)CC2CCCC2)s1 Homo sapiens CHEMBL4619395 assay format
CHEMBL4640884 OBDepict HO NH O H N O H O N N H 3 C IC50 = 9.26 nM 452.56 Cc1ccc(-c2noc([C@@H]3CC4(CC4)CN3C(=O)[C@@H](CC(=O)NO)CC3CCCC3)n2)cc1 Homo sapiens CHEMBL4619395 assay format
CHEMBL4644600 OBDepict CH 3 H N O HN O H OH N H O N S CH 3 IC50 = 9.42 nM 408.52 CCCC[C@H](CC(=O)NO)C(=O)N1CC2(CC2)C[C@H]1C(=O)Nc1ncc(C)s1 Homo sapiens CHEMBL4619395 assay format
CHEMBL4638180 OBDepict HO N H O H N O H N H O N N IC50 = 9.53 nM 415.49 O=C(C[C@@H](CC1CCCC1)C(=O)N1CC2(CC2)C[C@H]1C(=O)Nc1ccncn1)NO Homo sapiens CHEMBL4619395 assay format
CHEMBL413726 OBDepict O N OH H N H O CH 3 CH 3 H H 3 C H 3 C CH 3 N O CH 3 H 3 C IC50 = 10.0 nM 329.44 CC(C)C[C@H](CN(O)C=O)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL96864 OBDepict CH 3 H N H O N OH H O CH 3 CH 3 H 3 C N O H 3 C CH 3 IC50 = 10.0 nM 343.47 CCCCC[C@H](CN(O)C=O)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL308333 OBDepict CH 3 H HN O HN O H OH N O H 3 C CH 3 H HO IC50 = 10.0 nM 385.51 CCCCC[C@H](CC(=O)NO)C(=O)N[C@H](C(=O)N1CCC[C@H]1CO)C(C)C Homo sapiens CHEMBL762380 single protein format
CHEMBL4636076 OBDepict HO HN O H N O H N H O N F IC50 = 10.9 nM 406.46 O=C(C[C@@H](CC1CCCC1)C(=O)N1CCC[C@H]1C(=O)Nc1ccc(F)cn1)NO Homo sapiens CHEMBL4619395 assay format
CHEMBL4645201 OBDepict HO N H O H N O H N H O N N IC50 = 13.1 nM 415.49 O=C(C[C@@H](CC1CCCC1)C(=O)N1CC2(CC2)C[C@H]1C(=O)Nc1cccnn1)NO Homo sapiens CHEMBL4619395 assay format
CHEMBL4643686 OBDepict HO NH O H N O H O N N N N IC50 = 16.1 nM 440.5 O=C(C[C@@H](CC1CCCC1)C(=O)N1CC2(CC2)C[C@H]1c1nc(-c2cnccn2)no1)NO Homo sapiens CHEMBL4619395 assay format
CHEMBL325246 OBDepict NH 2 HN H NH O O H HS + N CH 3 O _ O Ki = 19.0 nM 410.54 CCCC[C@H](CS)C(=O)N[C@@H](CCCCN)C(=O)Nc1ccc([N+](=O)[O-])cc1 Homo sapiens CHEMBL762385 single protein format
CHEMBL540441 OBDepict H 2 C H N H O N OH H O H 3 C H 3 C CH 3 N O CH 3 H 3 C IC50 = 20.0 nM 327.43 C=CCC[C@H](CN(O)C=O)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL328502 OBDepict O N OH H N H O H H 3 C H 3 C CH 3 N O CH 3 H 3 C IC50 = 20.0 nM 341.45 CN(C)C(=O)[C@@H](NC(=O)[C@@H](CN(O)C=O)C1CCCC1)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL91882 OBDepict O N HO H N H O H CH 3 H 3 C CH 3 CH 3 H 3 C N O H 3 C CH 3 IC50 = 20.0 nM 343.47 CC(C)CC[C@H](CN(O)C=O)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL328688 OBDepict O N HO H N H O H CH 3 CH 3 H 3 C N O H 3 C CH 3 IC50 = 20.0 nM 363.46 CN(C)C(=O)[C@@H](NC(=O)[C@H](Cc1ccccc1)CN(O)C=O)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL91835 OBDepict H 3 C S H N H O N OH H O H 3 C H 3 C CH 3 N O CH 3 H 3 C IC50 = 20.0 nM 347.48 CCSC[C@H](CN(O)C=O)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL4649755 OBDepict HO NH O H N O H O N N CH 3 IC50 = 29.3 nM 376.46 Cc1noc([C@@H]2CC3(CC3)CN2C(=O)[C@@H](CC(=O)NO)CC2CCCC2)n1 Homo sapiens CHEMBL4619395 assay format
CHEMBL315668 OBDepict CH 3 H HN O N OH H O H 3 C CH 3 H 3 C N O H 3 C CH 3 IC50 = 30.0 nM 357.5 CCCCCC[C@H](CN(O)C=O)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL93648 OBDepict CH 2 H N H O N OH H O CH 3 CH 3 H 3 C N O H 3 C CH 3 IC50 = 30.0 nM 313.4 C=CC[C@H](CN(O)C=O)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL91461 OBDepict O N OH H N H O H CH 3 H 3 C H 3 C CH 3 N O CH 3 H 3 C IC50 = 30.0 nM 325.41 CC#CC[C@H](CN(O)C=O)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL4641571 OBDepict HO NH O H N O H N H O N N CH 3 IC50 = 30.2 nM 417.51 Cn1cc(NC(=O)[C@@H]2CC3(CC3)CN2C(=O)[C@@H](CC(=O)NO)CC2CCCC2)cn1 Homo sapiens CHEMBL4619395 assay format
CHEMBL88314 OBDepict H 3 C H N H O N OH H O H 3 C H 3 C CH 3 N O CH 3 H 3 C IC50 = 40.0 nM 371.52 CCCCCCC[C@H](CN(O)C=O)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL90378 OBDepict O N OH H N H O H 3 C CH 3 H H 3 C H 3 C CH 3 N O CH 3 H 3 C IC50 = 50.0 nM 315.41 CC(C)[C@H](CN(O)C=O)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL327700 OBDepict CH 3 H N H O N OH H O CH 3 CH 3 H 3 C N O H 3 C CH 3 IC50 = 50.0 nM 315.41 CCC[C@H](CN(O)C=O)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL314241 OBDepict H 3 C H NH O N HO H O CH 3 CH 3 CH 3 N O CH 3 CH 3 IC50 = 50.0 nM 385.55 CCCCCCCC[C@H](CN(O)C=O)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL84969 OBDepict H 3 C N H O N HO H O CH 3 CH 3 H 3 C N O CH 3 CH 3 IC50 = 70.0 nM 329.44 CCCCC(CN(O)C=O)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762380 single protein format
CHEMBL90091 OBDepict CH 3 H N H O N OH H O H 3 C H 3 C CH 3 N O CH 3 H 3 C IC50 = 70.0 nM 301.39 CC[C@H](CN(O)C=O)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL93332 OBDepict H 3 C H N H O N OH H O H 3 C H 3 C CH 3 N O CH 3 H 3 C IC50 = 70.0 nM 329.44 CCCC[C@@H](CN(O)C=O)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL92692 OBDepict O N HO CH 3 H N H O H CH 3 CH 3 H 3 C N O H 3 C CH 3 IC50 = 100.0 nM 287.36 C[C@H](CN(O)C=O)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL120479 OBDepict H 3 C H N H O HN O H NH 2 H 3 C H 3 C CH 3 N O CH 3 H 3 C IC50 = 200.0 nM 328.46 CCCC[C@H](CC(=O)NN)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762381 single protein format
CHEMBL94197 OBDepict O N OH H N H O H H 3 C H 3 C CH 3 N O H 3 C H 3 C O CH 3 IC50 = 200.0 nM 393.48 COc1ccc(C[C@H](CN(O)C=O)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C)cc1 Homo sapiens CHEMBL762382 single protein format
CHEMBL422256 OBDepict H 3 C H N H O O OH H H 3 C H 3 C CH 3 N O CH 3 H 3 C IC50 = 200.0 nM 314.43 CCCC[C@H](CC(=O)O)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762381 single protein format
CHEMBL94198 OBDepict O N OH H HN O H Cl H 3 C CH 3 H 3 C N O H 3 C CH 3 IC50 = 500.0 nM 383.88 CN(C)C(=O)[C@@H](NC(=O)[C@@H](CN(O)C=O)c1ccc(Cl)cc1)C(C)(C)C Homo sapiens CHEMBL762382 single protein format
CHEMBL91105 OBDepict H 3 C H N CH 3 N H O OH O H CH 3 CH 3 H 3 C N O H 3 C CH 3 IC50 = 600.0 nM 343.47 CCCC[C@@H](C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C)C(C)N(O)C=O Homo sapiens CHEMBL762382 single protein format
CHEMBL93365 OBDepict H 3 C H N H O N H OH H 3 C H 3 C CH 3 N O O CH 3 H 3 C IC50 = 1000.0 nM 343.47 CCCC[C@H](CCN(O)C=O)C(=O)N[C@H](C(=O)N(C)C)C(C)(C)C Homo sapiens CHEMBL762382 single protein format